FastQCFastQC Report
Tue 2 Dec 2025
68208-7_R1.clean.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename68208-7_R1.clean.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17103813
Sequences flagged as poor quality0
Sequence length40-150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG21050.07.3329353140-144
CGCAATC39800.06.9402037140-144
GCGCAAT42650.06.857405140-144
CGTATGC28050.06.5649457140-144
TCGCGTA4450.00195529646.3031282130-134
TATCTCG32650.06.2206125140-144
CTCGTAT32050.05.9145966140-144
CAATCTA53850.05.431167140-144
Produced by FastQC (version 0.11.3)