FastQCFastQC Report
Wed 3 Dec 2025
81948-8_R2.clean.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename81948-8_R2.clean.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3685309
Sequences flagged as poor quality0
Sequence length40-150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCA6200.00988099317.440275135-139
TATCACG3150.005374050211.2176237
ACGAACA5805.991258E-48.790874140-144
CGGAACG5600.0046668768.1129655
AACTCGA6000.008663057.57210164
TCGCGTT1800.00686523976.169592415-19
ACCCATC20159.366504E-75.51191142
AACTTAA12500.00614587785.24998954
Produced by FastQC (version 0.11.3)